Manual Pages for UNIX Darwin command on man MPI_Scan
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Manual Pages for UNIX Darwin command on man MPI_Scan

MPIScan(3OpenMPI) MPIScan(3OpenMPI)

NAME

MMPPIISSccaann - Computes an inclusive scan (partial reduction)

SSYYNNTTAAXX CC SSyynnttaaxx

#include

int MPIScan(void *sendbuf, void *recvbuf, int count, MPIDatatype datatype, MPIOp op, MPIComm comm) FFoorrttrraann SSyynnttaaxx INCLUDE 'mpif.h'

MPISCAN(SENDBUF, RECVBUF, COUNT, DATATYPE, OP, COMM, IERROR)

SENDBUF(*), RECVBUF(*)

INTEGER COUNT, DATATYPE, OP, COMM, IERROR

CC++++ SSyynnttaaxx

#include

void MPI::Intracomm::Scan(const void* sendbuf, void* recvbuf, int count, const MPI::Datatype& datatype, const MPI::Op& op) const IINNPPUUTT PPAARRAAMMEETTEERRSS sendbuf Send buffer (choice). count Number of elements in input buffer (integer). datatype Data type of elements of input buffer (handle). op Operation (handle). comm Communicator (handle). OOUUTTPPUUTT PPAARRAAMMEETTEERRSS recvbuf Receive buffer (choice).

IERROR Fortran only: Error status (integer).

DESCRIPTION

MPIScan is used to perform an inclusive prefix reduction on data dis-

tributed across the calling processes. The operation returns, in the recvbuf of the process with rank i, the reduction (calculated according to the function op) of the values in the sendbufs of processes with ranks 0, ..., i (inclusive). The type of operations supported, their semantics, and the constraints on send and receive buffers are as for MPIReduce. EEXXAAMMPPLLEE

This example uses a user-defined operation to produce a segmented scan.

A segmented scan takes, as input, a set of values and a set of logi-

cals, where the logicals delineate the various segments of the scan. For example, values v1 v2 v3 v4 v5 v6 v7 v8 logicals 0 0 1 1 1 0 0 1 result v1 v1+v2 v3 v3+v4 v3+v4+v5 v6 v6+v7 v8 The result for rank j is thus the sum v(i) + ... + v(j), where i is the

lowest rank such that for all ranks n, i <= n <= j, logical(n) = logi-

cal(j). The operator that produces this effect is [ u ] [ v ] [ w ] [ ] o [ ] = [ ] [ i ] [ j ] [ j ] where ( u + v if i = j w = ( ( v if i != j Note that this is a noncommutative operator. C code that implements it is given below. typedef struct { double val; int log; } SegScanPair; /*

* the user-defined function

*/ void segScan(SegScanPair *in, SegScanPair *inout, int *len, MPIDatatype *dptr) { int i; SegScanPair c; for (i = 0; i < *len; ++i) {

if (in->log == inout->log)

c.val = in->val + inout->val;

else

c.val = inout->val;

c.log = inout->log;

*inout = c; in++; inout++; } }

Note that the inout argument to the user-defined function corresponds

to the right-hand operand of the operator. When using this operator, we

must be careful to specify that it is noncommutative, as in the follow-

ing: int i, base; SeqScanPair a, answer; MPIOp myOp; MPIDatatype type[2] = {MPIDOUBLE, MPIINT}; MPIAint disp[2]; int blocklen[2] = {1, 1}; MPIDatatype sspair; /* * explain to MPI how type SegScanPair is defined */ MPIGetaddress(a, disp); MPIGetaddress(a.log, disp + 1); base = disp[0]; for (i = 0; i < 2; ++i)

disp[i] -= base;

MPITypestruct(2, blocklen, disp, type, &sspair); MPITypecommit(&sspair); /*

* create the segmented-scan user-op

* noncommutative - set commute (arg 2) to 0

*/ MPIOpcreate((MPIUserfunction *)segScan, 0, &myOp); ... MPIScan(a, answer, 1, sspair, myOp, comm);

UUSSEE OOFF IINN-PPLLAACCEE OOPPTTIIOONN

WHen the communicator is an intracommunicator, you can perform a scan-

ning operation in place (the output buffer is used as the input buffer). Use the variable MPIINPLACE as the value of the sendbuf argument. The input data is taken from the receive buffer and replaced by the output data. NNOOTTEESS OONN CCOOLLLLEECCTTIIVVEE OOPPEERRAATTIIOONNSS The reduction functions of type MPIOp do not return an error value. As a result, if the functions detect an error, all they can do is either call MPIAbort or silently skip the problem. Thus, if the error

handler is changed from MPIERRORSAREFATAL to something else (e.g.,

MPIERRORSRETURN), then no error may be indicated.

The reason for this is the performance problems in ensuring that all collective routines return the same error value. EERRRROORRSS Almost all MPI routines return an error value; C routines as the value

of the function and Fortran routines in the last argument. C++ func-

tions do not return errors. If the default error handler is set to

MPI::ERRORSTHROWEXCEPTIONS, then on error the C++ exception mechanism

will be used to throw an MPI:Exception object. Before the error value is returned, the current MPI error handler is called. By default, this error handler aborts the MPI job, except for I/O function errors. The error handler may be changed with

MPICommseterrhandler; the predefined error handler MPIERRORSRETURN

may be used to cause error values to be returned. Note that MPI does not guarantee that an MPI program can continue past an error. See the MPI man page for a full list of MPI error codes.

SEE ALSO

MPIExscan MPIOpcreate MPIReduce Open MPI 1.2 September 2006 MPIScan(3OpenMPI)




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